[VoxBo] vbdumpstats and timeseries question
Ranjani Prabhakaran
prabhakr at sas.upenn.edu
Mon Jun 22 11:41:29 EDT 2009
Hi,
I'm trying to use vbdumpstats to get ROI beta values. I saved a
functional mask for a subject and then used vbdumpstats to get the
beta value for the voxels in that mask. According to vbdumpstats,
there are 48 voxels in that mask. But when I loaded my .prm file
using idl, applied the mask, and checked the number of voxels - there
are supposed to be 101 voxels in the mask.
Also, when I use the idl "Find All" tool to find out how many voxels
are in the mask, I've been getting the following message:
(21) No time-series available for requested region
[called from: READTIMESERIES </usr/local/VoxBo/pros/VoxBo_10.pro(1712)>]
The glm for the subject ran without any problems and I can load
the .prm file in idl, so I'm not sure what the source of this problem
is.
The subject's glm is located here: /xjet/prabhakr/michigan_celeb_cfn/
s16_cfn/models/s16_collapsed_gs
And the subject's masks are located here: /xjet/prabhakr/
michigan_celeb_cfn/s16_cfn/Anatomy/LIFG_Masks
Any ideas about why I'm getting this message and why there's a
discrepancy in the number of voxels reported in the mask?
Thanks in advance for your help!
- Ranjani
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