[VoxBo] Job control - environment variables and excluding machines
Daniel Kimberg
kimberg at mail.med.upenn.edu
Fri Jan 23 08:16:28 EST 2009
Phil Cook wrote:
> I have two questions about vbbatch:
Not sure if this is still relevant, but just in case...
> 1. Is it possible to pass environment variables to the cluster. In SGE
> I would do something like "qsub -v HOME=/home/pcook". Is this possible
> with voxbo?
You can prepend environment variables to the command line the same way you would do from the shell. E.g.:
vbbatch -c "ABABAB=xxx mycommand_here" a b c -r
(if you use something like "env > myenv.txt" as your command, you can satisfy yourself that it's working)
> 2. Can I exclude certain machines from receiving my jobs?
There's a mechanisms for indicating which machines have some facility you need (e.g., the non-crashing facility), but right now users can't do it manually, you'd need to get us to tag the machines in the cluster configuration. Actually, I don't think you can do it with vbbatch at all.
dan
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