[VoxBo] 2 questions

Charan Ranganath cranganath at ucdavis.edu
Thu Dec 11 23:32:13 EST 2008


Dear Jong, that'd be great if you could send it over. Thanks! CR

Jong Yoon wrote:
> Hi Charan,
> 
> We have a perl script that adds that line.  Let me know if you want met 
> to email it you.
> 
> jy
> 
> 
> On Dec 11, 2008, at 11:14 AM, Charan Ranganath wrote:
> 
>> Hi Dan and crew, I know this has come up before, but I can't remember 
>> how to deal with the problem, so here's some deja vu all over again:
>>
>> We are using the newest posted version of voxbo. The GLM module now 
>> assumes a TR of 1s if none is specified in the header of the .tes 
>> file, and I wasn't able to find a way to manually set this. It appears 
>> that the program is looking for a line in the header of the .tes files 
>> like this:
>> TR(msecs):    2000
>>
>> Unfortunately, vb2tes does not have a flag for inserting the TR. I 
>> realize that vbhdr is supposed to allow easy insertion of lines in the 
>> .tes header, but from the scant documentation, I was unable to figure 
>> out the exact syntax to add this line (with tab between the colon and 
>> 2000).
>>
>> So my questions are:
>> (1) Can you tell me how to add a TR line to .tes files?
>> (2) Is it possible to manually override the assumed TR in the GLM module?
>> (3) Can you alter either vb2tes or vbconvert to have a flag for the TR 
>> line (something like vb2tes foo/ bar.tes -TR 666)? I seem to remember 
>> this was in an old version of vb2tes but got lost. But maybe that is 
>> wishful thinking.
>>
>> Thanks in advance for your help! CR
>> -- 
>> Charan Ranganath, Ph.D.
>> Associate Professor
>> Center for Neuroscience &
>> Department of Psychology
>> University of California at Davis
>> 1544 Newton Ct.
>> Davis, CA 95618
>>
>> Ph.:  530.757.8750
>> Fax: 530.757.8640
>> http://dml.ucdavis.edu
> 
> 

-- 
Charan Ranganath, Ph.D.
Associate Professor
Center for Neuroscience and Dept. of Psychology
University of California at Davis
1544 Newton Ct.
Davis, CA 95618

phone: 530-757-8750
fax: 530-757-8640
http://dml.ucdavis.edu


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