[VoxBo] Question about multiple contrasts in a glm
David January
djanuary at sas.upenn.edu
Thu Oct 18 09:06:24 EDT 2007
Hello everyone,
I'm trying to find a linear trend among conditions in my data. The
glm I have designed can be abstracted to be of the following kind,
with the conditions as column headings and the contrast covariates I
have included in the glm as the numbers below the column headings:
Rest CondA CondB CondC
0 1 1 1
0 -1 0 1
0 .5 -1 .5
This combination of covariates should allow me to detect any relation
among the conditions that I care about.
My question is this: if I want to which regions are showing the
pattern C > B > A, what do I enter in voxelsurfer (or vbview) to find
this? I want B > rest, so I don't think I should just generate a
parametric map for covariate 2 alone; I should do both 1 and 2, right?
But is just giving each of them a weight of 1 (and giving the 3rd a 0
weight) the correct thing to do? Is there a problem with having the
weights I enter not even out to 0 (the way I would if I were directly
comparing A and B, for example)? Also, when I do a random effects
analysis, should I set the contrast to include both covs 1 and 2?
would that cause any problems?
Sorry to be asking such a question, but my understanding of the
semantics of the commands is limited.
--
David January
Department of Psychology
University of Pennsylvania
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