[VoxBo] Voxel Count Reported by vbxts

Daniel Y Kimberg kimberg at mail.med.upenn.edu
Wed Apr 11 13:21:51 EDT 2007


Sunil Patel wrote:
> [I] vbxts: region BilateralDorsCingMedPremotor.cub (2670 voxels)
...
> [I] vbxts: region BilateralDorsCingMedPremotor.cub (2365 voxels)
...
> When I used vbmaskcompare to check the voxel count, it reported a
> voxel count of 2738 voxels, which is the same count I get when I
> load the mask image data in matlab and sum the data array.

I wasn't sure from your message if you checked to make sure the two
GLMs have the same number of voxels inside the mask.  Voxels for which
there is no data aren't counted.  You can usually eyeball it to check,
but you can also use vbmaskmunge to get the mask intersections, to be
sure.  Note that if you give vbmaskmunge a tes file as input, it uses
the tes mask (mask of where there's data).

dan


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