[VoxBo] getting timeseries

Jong H. Yoon, MD jhyyoon at ucdavis.edu
Thu Sep 14 15:08:38 EDT 2006


I have a matlab script for an older version of Voxbo that computes  
percent signal changes.  Drop me a line if you want this.

Jong Yoon


On Sep 13, 2006, at 3:10 PM, Daniel Drucker wrote:

> Has anyone written anything to make this easier than doing it by  
> hand 250 times?
>
> (note: extracting this timeseries information in jlextract has
> explicitly been found to not work already, which is why I'm trying to
> do it another way.)
>
>
> On 9/13/06, Daniel Y Kimberg <kimberg at mail.med.upenn.edu> wrote:
>> Daniel Drucker wrote:
>> > Hey Dongbo:
>> >
>> > for 10 subjects...
>> >      for 5 conditions...
>> >           for 5 masks...
>> >
>> > I want to programatically do the equivalent of finding the region,
>> > going into Voxel Surfer, selecting Trial Index: (condition), #  
>> images:
>> > 8 and saving the time series.
>> >
>> > Is this possible?
>>
>> You could probably do it with some IDL hacking.  I have a time series
>> extraction program in the works, but it's not ready for prime time
>> yet.  You'll be able to specify a GLM, a mask, and an averaging thing
>> from your averages.txt file.
>
>
> -- 
> Daniel Drucker <ddrucker at psych.upenn.edu>
> Graduate Student
> Center for Cognitive Neuroscience
> University of Pennsylvania

Jong H. Yoon, MD
Assistant Professor of Clinical Psychiatry
University of California Davis
916-734-0867







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