[VoxBo] way to automate?
Daniel Y Kimberg
kimberg at mail.med.upenn.edu
Thu Sep 7 15:59:45 EDT 2006
Meeri Kim wrote:
> Is there a way to automate the glm analysis of multiple subjects? We
> have 25 subjects and were wondering if there is a faster way to tell
> voxbo to go through the process of using vbview to open the .tes
> file, removing covariates of no interest, averaging, etc. if we are
> doing the same actions to all subjects individually.
I'm a little confused, what exactly are you trying to automate?
vbview lets you extract time series, and unfortunately I haven't yet
released a tool to do that at the command line. But I will soon. If
you're using vbview to get region stats, you can do that with
vbdumpstats. If you're trying to automate the GLM design, you can do
that using gds. The syntax is a little arcane, but it's great once
you get the hang of it, and ultimately it will save you a lot of time.
dan
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