[VoxBo] filtering .tes files

Rachel Diana radiana at ucdavis.edu
Tue Oct 10 14:09:18 EDT 2006


Leaving out the trailing slash does help.  It got us a bit further through
the process but now I'm getting a different error after slice 17.  We have
a total of 27 slices.  I've copied the output below.  Has anyone seen this
error before?
Thanks very much!
-Rachel

vbmakeresid /data5/mvpa/dh/voxbo_analyses/glm_filter_for_mvpa
/filtered_data.tes
[I] vbmakeresid: calculating residuals for slice 0
[I] vbmakeresid: calculating residuals for slice 1
[I] vbmakeresid: calculating residuals for slice 2
[I] vbmakeresid: calculating residuals for slice 3
[I] vbmakeresid: calculating residuals for slice 4
[I] vbmakeresid: calculating residuals for slice 5
[I] vbmakeresid: calculating residuals for slice 6
[I] vbmakeresid: calculating residuals for slice 7
[I] vbmakeresid: calculating residuals for slice 8
[I] vbmakeresid: calculating residuals for slice 9
[I] vbmakeresid: calculating residuals for slice 10
[I] vbmakeresid: calculating residuals for slice 11
[I] vbmakeresid: calculating residuals for slice 12
[I] vbmakeresid: calculating residuals for slice 13
[I] vbmakeresid: calculating residuals for slice 14
[I] vbmakeresid: calculating residuals for slice 15
[I] vbmakeresid: calculating residuals for slice 16
[I] vbmakeresid: calculating residuals for slice 17
terminate called after throwing an instance of 'std::bad_alloc'
  what():  St9bad_alloc
Aborted


> Rachel Diana wrote:
> > Charan and I tried to use vbmakeresid, but got a segmentation fault
> after
> > starting to calculate residuals for slice 0.
> >
> > Here is the command that we typed in:
> >  vbmakeresid /data5/mvpa/dh/voxbo_analyses/glm_filter_for_mvpa/
> > ./filtered_data.tes
> 
> I'm getting the same segfault, but only when I include the trailing
> slash in the name of the glm directory.  See it if helps to omit it,
> and I'll see about making the code less temperamental.
> 
> dan
>
 


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